5.12.4. The Slow Query Log
The slow query log consists of all SQL statements that took more than long_query_time seconds to execute. The time to acquire the initial table locks is not counted as execution time. mysqld writes a statement to the slow query log after it has been executed and after all locks have been released, so log order might be different from execution order. The minimum and default values of long_query_time are 1 and 10, respectively.
Great tool to find low hanging fruit in your database application.